Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015840769.1_cds_XP_016507739.1_20834
CDS Infomation

[gene=LOC107825396] [db_xref=GeneID:107825396] [protein=CDPK-related kinase 4-like] [protein_id=XP_016507739.1] [location=complement(join(9587..9727,9803..9970,10746..10808,10937..11041,11140..11249,11407..11703,13495..13573,13688..13796,13874..13915,14437..14567,15385..15939))] [gbkey=CDS]
Sequence

ATGGGGCACTGCTGCAGTAAGGGTGTTACCGCCGATAATGACGGTCACGTCGTTGCCGTC
GTTGACGGAAACTCCGCCGTGTCCACAAACAACCGCCGCAAACCATCACCGTCACCGGCA
CGTCCACAGTCCGTCGGGAACGGGACGAGTTACACTAACAACAACACGCCAGCTCATTCC
TTTACCACCAGTCCTTTTCAGAGCCCATACCCTGCCGGAATACCTCCCTCCCCGTCTCCG
GTCGGAACGCCGAGAAGGAAATTCAAGTGGCCATTTCCACCGCCGTCGCCGGCGAAGCCT
ATATTATCGGCGATCCTTAAGCGGCAGGGAACAACGTCAGCAAAGCCGAAAGAAGGGCCA
ATACCGGAAGATGAAGGTGGTGAAGGTGAGAGACAGCTGGATAAAAGCTTTGGTTATCCA
AAGAACTTGACGGCAAAGTATGAGCTTGGAAAGGAAGTAGGTCGAGGGCATTTTGGACAT
ACTTGTTGGGCTAAAGGTAAAAAAGGTGAACTTAAAAATCAACCGGTCGCTGTGAAGATC
ATTTCAAAATCTAAGATGACAACAGCTATATCTATCGAAGATGTTCGCAGGGAGGTGAAG
ATATTGAAGGCCTTGTCTGGACATCAGAATCTTGTCAAGTTTTATGATGCCTTTGAGGAT
GCCAACAATGTCTACATAGTAATGGAGTTATGTGAAGGAGGGGAACTATTGGACCGGATT
CTATCAAGAGGTGGGAGATACACAGAGGAGGATGCCAAAAGTATACTGGTTCAAATACTA
AATGTTGTCGCCTTTTGTCATCTTCAAGGTGTGGTCCACCGTGATCTGAAGCCAGAGAAC
TTCCTTTTTACGAAGAAAGAAGAGGATGCACCAATGAAGGTTATTGATTTTGGTCTATCA
GACTTCATCAGACCAGATCAACGTCTTAATGATATTGTTGGCAGTGCATACTATGTTGCA
CCTGAAGTACTTCATAGGTCATACAGTATTGAAGCAGATATGTGGAGTATTGGTGTGATA
ACGTATATCTTATTATGTGGAAGTAGACCTTTCTGGGCACGTACAGAGTCAGGCATTTTT
CGATCCGTGTTACGAGCGGATCCTAATTTTGAGGACTCACCTTGGCCTTCAGTGTCTGCA
GAGGCCAGGGATTTTGTGAAAAGGCTTTTGAATAAAGACCATAGGAAGAGAATGACCGCT
TCTCAAGCACTGGCTCATCCATGGTTAAGGACGGGAAATCCTGTTTTACCTTTAGACATA
CTGATCTTTAAATTAGTCAAGTCTTATACTCGAGCCTCACCCTTGAAACGTGCAGCATTG
AAGGCTCTTTCAAAAGCATTGACAGAAGAAGAGTTAATCTACCTCAGGGCACAATTCAAT
TTATTGGAACCGAAAGATGGTCGTGTGTCACTCAACAATTTTAAGATGGCACTTACTAAA
CAAATGACTGATGCCATGAGGGAGTCGAGAGTTTTTGACATCTTAAATTTGATGGAACCA
TTATCCTATAAACCGCTGGATTTTGAAGAGTTCTGTGCTGCCGCAATTAGTACATATCAG
CTTGAGGCTCTTGAAAATTGGGAACAAATTGCTAGTGCCGCTTTTGAGTATTTTGAGCAA
GAAGGAAACCGTATCATTTCCGTTGAGGAATTAGCACAGGAAATGAATTTGGGCCCTACG
GCTTATGCTTTTCTCAAGGATTGCATTAGACCATCTGATAGAAAATTGAGTTTCCTTGGG
TATACCAAATATTTGCATGGTGTGACAATTCGTGGTTCAAGCACAAGACATCATCGATAA

Peptide Sequence

PEP ID

XP_016507739.1
PEP Infomation

PREDICTED: CDPK-related kinase 4-like [Nicotiana tabacum]
Sequence

MGHCCSKGVTADNDGHVVAVVDGNSAVSTNNRRKPSPSPARPQSVGNGTSYTNNNTPAHS
FTTSPFQSPYPAGIPPSPSPVGTPRRKFKWPFPPPSPAKPILSAILKRQGTTSAKPKEGP
IPEDEGGEGERQLDKSFGYPKNLTAKYELGKEVGRGHFGHTCWAKGKKGELKNQPVAVKI
ISKSKMTTAISIEDVRREVKILKALSGHQNLVKFYDAFEDANNVYIVMELCEGGELLDRI
LSRGGRYTEEDAKSILVQILNVVAFCHLQGVVHRDLKPENFLFTKKEEDAPMKVIDFGLS
DFIRPDQRLNDIVGSAYYVAPEVLHRSYSIEADMWSIGVITYILLCGSRPFWARTESGIF
RSVLRADPNFEDSPWPSVSAEARDFVKRLLNKDHRKRMTASQALAHPWLRTGNPVLPLDI
LIFKLVKSYTRASPLKRAALKALSKALTEEELIYLRAQFNLLEPKDGRVSLNNFKMALTK
QMTDAMRESRVFDILNLMEPLSYKPLDFEEFCAAAISTYQLEALENWEQIASAAFEYFEQ
EGNRIISVEELAQEMNLGPTAYAFLKDCIRPSDRKLSFLGYTKYLHGVTIRGSSTRHHR

Transcript Sequence

Gene sequence data has not been registered.